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These projects span scientific databases, microscopy tooling, browser-based 3D visualisation, research interfaces, and infrastructure-heavy systems. Some are public, some institutional, but all show the same working style: practical engineering for difficult problems.
29 projects
Featured case studies
Start here if you want the clearest view of the strongest public-facing work.
A scientific database and web platform that connects synaptic proteins, genes, mutations, diseases, and publications for synaptopathy research. Built as the main software surface for a project that became a Scientific Reports publication, with unified search, data exploration, export, and API access.
A distributed research software platform for microscopy processing and synaptome analysis at the University of Edinburgh. It combines web applications, queueing, orchestration, GPU-enabled pipelines, and internal tools into one operational system that supports day-to-day neuroscience workflows.
Archive
2025
An interactive 3D brain atlas platform featuring human and mouse brain visualizations with real-time neural simulations. Built with Three.js, featuring Desikan-Killiany Atlas (43 regions) for human brain and Allen CCFv3 Atlas (25 regions) for mouse brain with connectivity-based activity propagation.
Solo Developer
Research project
2025
An interactive web application for visualizing SV2A synaptic vesicle protein density and intensity measurements across mouse brain regions, developmental stages, and sex differences. Built for the Grant Lab at University of Edinburgh, featuring dual-metric analysis and comprehensive sex-specific data visualization.
Lead Developer
Research project
2025
An interactive web application for visualizing PSD95 proximity index measurements across 43 mouse brain regions and 4 developmental stages. Built for the Grant Lab at University of Edinburgh, featuring SVG-based brain atlas, real-time data visualization, and comprehensive research methodology documentation.
Lead Developer
Research project
2025
A browser-based ROI annotation tool for large microscopy montage images. Built with Flask and Three.js so researchers can inspect, annotate, transform, and export ROI overlays directly in the browser instead of relying on desktop-only workflows.
Lead Developer
Research project
2025
A scientific database and web platform that connects synaptic proteins, genes, mutations, diseases, and publications for synaptopathy research. Built as the main software surface for a project that became a Scientific Reports publication, with unified search, data exploration, export, and API access.
Lead Web Developer
Research project
2025
A web application for generating publication-ready brain region heatmaps from experimental data. Supports multiple atlas templates, scientific colormaps, CSV upload, and PNG/SVG export, replacing manual atlas colouring with a reproducible workflow.
Lead Developer
Research project
2025
A full-stack colony management platform for transgenic mouse facilities, with AI-assisted querying and approval-gated updates. It replaces spreadsheet-heavy tracking with a centralised system for mice, matings, litters, cages, genotypes, reporting, and audit history.
Lead Developer
Research project
2025
An internal AI workflow platform with a visual builder for composing repeatable multi-step automations. It supports multiple model providers, real-time execution tracking, file processing, and administrative controls in one system.
Lead Developer
Research project
2025
A modern image layout and design tool with a drag-and-drop canvas editor. Built with Next.js 14 and Fabric.js, featuring alignment tools, text editing, layer management, and multi-format export.
Solo Developer
Independent project
2025
A Python-native synaptic protein detection pipeline for fluorescence microscopy. It replaces a manual Fiji/TrackMate step with an automatable workflow that fits directly into the lab's broader Python analysis stack.
Lead Developer
Research project
2025
Full-stack research lab website for the Seth Grant Lab at the University of Edinburgh. Built with Next.js 14 and FastAPI, featuring MDX content management, team profiles, publications database, and research tool documentation.
Lead Developer
Research project
2025
A full-stack browser for public S3-compatible storage that makes object buckets easier to inspect, preview, and share from the web. Built as a public open-source tool with multi-format preview, shareable paths, and download-friendly workflows.
Solo Developer
Independent project
2025
A full-stack database application for exploring synaptic connection data through charts, flow diagrams, and searchable records. It turns a large connectivity dataset into a navigable research interface instead of leaving it trapped in raw tables.
Lead Developer
Research project
2025
A cross-platform desktop ROI editor for scientific microscopy workflows. Built with PySide6 and published on PyPI, it gives researchers a fast local tool for annotation, ROI editing, and ImageJ-compatible interoperability without relying on heavyweight proprietary software.
Solo Developer
Research project
2024
A GPU-accelerated Python tool for classifying millions of microscopy datapoints into polygonal regions of interest. Built to make region-based analysis practical on large datasets instead of turning point-in-polygon classification into a bottleneck.
Solo Developer
Research project
2024
A comprehensive statistical analysis framework for neuroscience research data. Supports multi-group comparisons (ANOVA, t-tests, Mann-Whitney), post-hoc corrections (Bonferroni, Tukey HSD), effect size calculations, and publication-ready visualisations via R/ggplot2 integration.
Solo Developer
Research project
2024
A Python tool for generating publication-quality SVG and PNG heatmaps from brain anatomical templates. Supports intensity and density visualisations across Brodmann areas with scientific colour palettes including magma and viridis.
Solo Developer
Research project
2024
A Three.js + Flask interactive web tool for drawing polyline boundaries on large microscopy images and generating uniform ROI grids. Supports 5GB+ file uploads, server-side image adjustments, and exports ImageJ-compatible ROI ZIP files.
Solo Developer
Research project
2024
A classification engine for identifying synaptic subtypes from multi-protein colocalization data. Processes detected synapse markers (PSD95, SAP102, GluN1, etc.) and classifies each synapse into molecularly defined subtypes based on marker presence and intensity patterns.
Solo Developer
Research project
2024
A distributed research software platform for microscopy processing and synaptome analysis at the University of Edinburgh. It combines web applications, queueing, orchestration, GPU-enabled pipelines, and internal tools into one operational system that supports day-to-day neuroscience workflows.
Lead Developer & Infrastructure Architect
Research project
2024
A suite of tools that converts proprietary microscopy formats such as ND2, CZI, and IMS into open TIFF-based workflows. Built to remove vendor lock-in and make large imaging datasets usable in reproducible analysis pipelines.
Solo Developer
Research project
2022
The Deep Chill Inventory Management System is a custom-built web application designed to streamline inventory tracking and calculations in a cold storage/blast freezing environment. This tablet-optimized solution helps staff track product quantities across different storage areas (Blast 1, Blast 2, Deep Chill, Holding, etc.) and automates calculations to save time and reduce errors during daily operations.
Full Stack Developer
Commercial project
2021
Automating Secure Infrastructure with Ansible streamlines SSH key management, user provisioning, and sudoers configuration to enhance security and efficiency. This project ensures password-less authentication, centralized sudo monitoring, and safe system administration through Infrastructure as Code (IaC).
DevOps Engineer
Academic project
2021
Code-Pad.me is an award-winning web application that lets users write, run, and share code instantly from any device. Built during my MSc at Nottingham Trent University, it eliminates the need for local compilers using a cloud-based execution system. Designed for learners and educators, it's perfect for coding challenges, teaching, and collaboration.
Solo Developer
Independent project
2021
Designed and built a fully functional e-commerce platform for footwear using C# ASP.NET MVC architecture. This coursework project demonstrates proficiency in web development frameworks, database integration, user authentication, and shopping cart functionality while following industry best practices.
Full Stack Developer
Academic project
2021
The Hycel Asset Management System is an IoT-integrated hydrogen leakage detection infrastructure built for Deakin University that visualizes real-time sensor data on interactive Google Maps. Using PHP, MySQL, JavaScript, and BigData integration, the system displays color-coded map markers with detailed sensor information panels showing temperature, humidity, and system status. The project features custom SQL queries for efficient data retrieval, a responsive interface for cross-device monitoring, and a built-in comment system for team communication. This safety-critical system enables early detection of potential hydrogen leaks, enhancing facility safety protocols and creating a scalable platform for the university's expanding Hycel precinct.
Full Stack Developer
Commercial project
2020
Designed and implemented a comprehensive Knowledge Base system for Veeble.com, creating an organized repository of technical documentation accessible to clients. The system features categorized articles spanning various hosting technologies with an intuitive navigation structure and search functionality. Performance optimizations were implemented to ensure quick access to critical support information.
WordPress Developer
Commercial project
2015
Developed and deployed a technical content platform using WordPress CMS, focusing on database technologies and systems administration topics. Customized themes and functionality to create an intuitive knowledge-sharing platform for programming and IT operations.
Full Stack Developer
Independent project
2013
A comprehensive MotoGP fan blog dedicated to legendary motorcycle racer Valentino Rossi (VR46), featuring race updates, rider interactions, event coverage, and exclusive content. The blog serves as a hub for racing enthusiasts to stay updated on Rossi's career and MotoGP events.
Creator & Writer
Independent project